Identification of Glycosylated Subtypes of Interferon-α Produced by Human Leukocytes

We found that interferon-α produced by human leukocytes contained four subtypes that were glycosylated by N-linkages according to the results of lectin blot analysis. These glycosylated subtypes were type H or type ω and thei sugar moieties had no relation to their biological activities.     

The influence of metabolic rate on otolith increment width in Atlantic salmon parr, Salmo salar L.

The influence of metabolic rate on otolith accretion in Atlantic salmon parr was investigated by comparing oxygen consumption rate and increment width in fast and slow growing individuals. Increment width was found to be positively correlated to mean daily oxygen consumption in both fast growing (S1) and slow growing (S2) parr. The results support previous suggestions that a process related to metabolic rate, rather than somatic growth, governs the rate of otolith accretion.     

Redox-state dependent blinking of single photosystem I trimers at around liquid-nitrogen temperature

Efficient light harvesting in a photosynthetic antenna system is disturbed by a ragged and fluctuating energy landscape of the antenna pigments in response to the conformation dynamics of the protein. This situation is especially pronounced in Photosystem I (PSI) containing red shifted chlorophylls (red Chls) with the excitation energy much lower than the primary donor. The present study was conducted to clarify light-harvesting dynamics of PSI isolated from Synechocystis sp. PCC6803 by using single-molecule spectroscopy at liquid?nitrogen temperatures. Fluorescence emission at around 720?nm from the red Chls in single PSI trimers was monitored at 80–100?K. Intermittent variations in the emission intensities, so-called blinking, were frequently observed. Its time scale lay in several tens of seconds. The blinking amplitude depended on the redox state of the phylloquinone (A₁). Electrochromic shifts of Chls induced by the negative charge on A₁ were calculated based on the X-ray crystallographic structure. A Chl molecule, Chl-A839 (numbering according to PDB 5OY0), bound near A₁ was found to have a large electrochromic shift. This Chl has strong exciton coupling with neighboring Chl (A838) whose site energy was predicted to be determined by interaction with an arginine residue (ArgF84) [Adolphs et al., 2010]. A possible scenario of the blinking was proposed. Conformational fluctuations of ArgF84 seesaw the excitation-energy of Chl-A838, which perturbs the branching ratio of excitation-energy between the red Chl and the cationic form of P700 as a quencher. The electrochromic shift of Chl-A839 enhances the effect of the conformation dynamics of ArgF84.     

Spatial and ecological population genetic structures within two island‐endemic Aeonium species of different niche width

The Crassulacean genus Aeonium is a well‐known example for plant species radiation on oceanic archipelagos. However, while allopatric speciation among islands is documented for this genus, the role of intra‐island speciation due to population divergence by topographical isolation or ecological heterogeneity has not yet been addressed. The aim of this study was to investigate intraspecific genetic structures and to identify spatial and ecological drivers of genetic population differentiation on the island scale. We analyzed inter simple sequence repeat variation within two island‐endemic Aeonium species of La Palma: one widespread generalist that covers a large variety of different habitat types (Ae. davidbramwellii) and one narrow ecological specialist (Ae. nobile), in order to assess evolutionary potentials on this island. Gene pool differentiation and genetic diversity patterns were associated with major landscape structures in both species, with phylogeographic implications. However, overall levels of genetic differentiation were low. For the generalist species, outlier loci detection and loci–environment correlation approaches indicated moderate signatures of divergent selection pressures linked to temperature and precipitation variables, while the specialist species missed such patterns. Our data point to incipient differentiation among populations, emphasizing that ecological heterogeneity and topographical structuring within the small scales of an island can foster evolutionary processes. Very likely, such processes have contributed to the radiation of Aeonium on the Canary Islands. There is also support for different evolutionary mechanisms between generalist and specialist species.     

Prominent role of volcanism in Common Era climate variability and human history

Climate reconstructions for the Common Era are compromised by the paucity of annually-resolved and absolutely-dated proxy records prior to medieval times. Where reconstructions are based on combinations of different climate archive types (of varying spatiotemporal resolution, dating uncertainty, record length and predictive skill), it is challenging to estimate past amplitude ranges, disentangle the relative roles of natural and anthropogenic forcing, or probe deeper interrelationships between climate variability and human history. Here, we compile and analyse updated versions of all the existing summer temperature sensitive tree-ring width chronologies from the Northern Hemisphere that span the entire Common Era. We apply a novel ensemble approach to reconstruct extra-tropical summer temperatures from 1 to 2010 CE, and calculate uncertainties at continental to hemispheric scales. Peak warming in the 280s, 990s and 1020s, when volcanic forcing was low, was comparable to modern conditions until 2010 CE. The lowest June–August temperature anomaly in 536 not only marks the beginning of the coldest decade, but also defines the onset of the Late Antique Little Ice Age (LALIA). While prolonged warmth during Roman and medieval times roughly coincides with the tendency towards societal prosperity across much of the North Atlantic/European sector and East Asia, major episodes of volcanically-forced summer cooling often presaged widespread famines, plague outbreaks and political upheavals. Our study reveals a larger amplitude of spatially synchronized summer temperature variation during the first millennium of the Common Era than previously recognised.     

Temperature‐growth divergence in white spruce forests of Old Crow Flats,Yukon Territory,and adjacent regions of northwestern North America

We present a new 23‐site network of white spruce ring‐width chronologies near boreal treeline in Old Crow Flats, Yukon Territory, Canada. Most chronologies span the last 300 years and some reach the mid‐16th century. The chronologies exhibit coherent growth patterns before the 1930s. However, since the 1930s, they diverge in trend and exhibit one of two contrasting, but well‐replicated patterns we call Group 1 and Group 2. Over the instrumental period (1930–2007) Group 1 sites were inversely correlated with previous‐year July temperatures while Group 2 sites were positively correlated with growth‐year June temperatures. At the broader northwestern North America (NWNA) scale, we find that the Group 1 and Group 2 patterns are common to a number of white spruce chronologies, which we call NWNA 1 and NWNA 2 chronologies. The NWNA 1 and NWNA 2 chronologies also share a single coherent growth pattern prior to their divergence (ca. 1950s). Comparison of the NWNA 1/NWNA 2 chronologies against gridded 20th‐century temperatures for NWNA and reconstructed northern hemisphere summer temperatures (ad 1300–2000) indicates that all sites responded positively to temperature prior to the mid‐20th century (at least back to ad 1300), but that some changed to a negative response (NWNA 1) while others maintained a positive response (NWNA 2). The spatial extent of divergence implies a large‐scale forcing. As the divergence appears to be restricted to the 20th century, we suggest that the temperature response shift represents a moisture stress caused by an anomalously warm, dry 20th‐century climate in NWNA, as indicated by paleoclimatic records. However, because some sites do not diverge and are located within a few kilometres of divergent sites, we speculate that site‐level factors have been important in determining the susceptibility of sites to the large‐scale drivers of divergence.     

A Simplified Mass-Transfer Model for Visual Pigments in Amphibian Retinal-Cone Outer Segments

When radiolabeled precursors and autoradiography are used to investigate turnover of protein components in photoreceptive cone outer segments (COSs), the labeled components—primarily visual pigment molecules (opsins)—are diffusely distributed along the COS. To further assess this COS labeling pattern, we derive a simplified mass-transfer model for quantifying the contributions of advective and diffusive mechanisms to the distribution of opsins within COSs of the frog retina. Two opsin-containing regions of the COS are evaluated: the core axial array of disks and the plasmalemma. Numerical solutions of the mass-transfer model indicate three distinct stages of system evolution. In the first stage, plasmalemma diffusion is dominant. In the second stage, the plasmalemma density reaches a metastable state and transfer between the plasmalemma and disk region occurs, which is followed by an increase in density that is qualitatively similar for both regions. The final stage consists of both regions slowly evolving to the steady-state solution. Our results indicate that autoradiographic and cognate approaches for tracking labeled opsins in the COS cannot be effective methodologies for assessing new disk formation at the base of the COS.     

Tree-ring dating of Russian Pomor settlements in Svalbard

Results of the tree-ring dating of samples from the three Russian settlements of the 18th century (Bjornbeinflyene, Palffyodden, and Schonningholmane) at Svalbard are presented. The present study is a development of a previous work (Chochorowski and Krapiec, 2017). These stations were discovered during excavations conducted by the Polish archaeological expedition of Jagiellonian University in the Sorkappland and Hornsund fjord regions of the Svalbard Archipelago. In total, 5 non-dated samples of the previous work were reanalyzed for these sites: Bjornbeinflyene (2 samples), Palffyodden (1 sample), Schonningholmane (1 sample) and relics from the landing site on the Torrflya coast (1 sample). All samples from these settlements are constructional elements of dwellings, appearing to be prefabricates brought from the continent, and only one of them is a driftwood timber. These floating chronologies were cross-dated against more than 200 master tree-ring chronologies from the Arctic coast, including as well our own data. Cross-dating was performed by CORINA software which includes t-values calculated with different detrending options. As a result, it was possible to successfully date and determine the place of origin of these samples. Results obtained do not contradict the data of radiocarbon and archaeological dating and indicate the possible use of wood from the territories of the White and Kara Sea basins as a building material for the Russian Pomor settlements in Svalbard.